IL_6GXN_038

3D structure

PDB id

6GXN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

6GXN|1|A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GXN|1|A|C|1043
6GXN|1|A|C|1044
6GXN|1|A|C|1045
6GXN|1|A|A|1046
6GXN|1|A|G|1047
6GXN|1|A|A|1048
6GXN|1|A|C|1049
6GXN|1|A|A|1050
6GXN|1|A|G|1051
6GXN|1|A|C|1052
*
6GXN|1|A|G|1107
6GXN|1|A|U|1108
6GXN|1|A|C|1109
6GXN|1|A|G|1110
6GXN|1|A|A|1111
6GXN|1|A|G|1112

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain 5

50S ribosomal protein L10

Chain G

50S ribosomal protein L6