IL_6GXN_161
3D structure
- PDB id
- 6GXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 6GXN|1|a|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GXN_161 not in the Motif Atlas
- Geometric match to IL_5J7L_049
- Geometric discrepancy: 0.3328
- The information below is about IL_5J7L_049
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
6GXN|1|a|U|1060
6GXN|1|a|G|1061
*
6GXN|1|a|C|1195
6GXN|1|a|A|1196
6GXN|1|a|A|1197
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain 7
- mRNA
- Chain c
- 30S ribosomal protein S3
- Chain e
- 30S ribosomal protein S5
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain v
- Peptide chain release factor RF1
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