IL_6GZ3_090

3D structure

PDB id

6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

6GZ3|1|A2|A|1941

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ3|1|A2|U|1938
6GZ3|1|A2|A|1939
6GZ3|1|A2|U|1940
6GZ3|1|A2|A|1941
6GZ3|1|A2|G|1942
6GZ3|1|A2|A|1943
6GZ3|1|A2|C|1944
6GZ3|1|A2|A|1945
6GZ3|1|A2|G|1946
*
6GZ3|1|A2|C|2003
6GZ3|1|A2|C|2004
6GZ3|1|A2|G|2005
6GZ3|1|A2|A|2006
6GZ3|1|A2|A|2007

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AK

ribosomal protein uL10

Chain AS

ribosomal protein eL20

Chain Am

ribosomal protein eL40