IL_6GZ3_193
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 6GZ3|1|B1|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ3_193 not in the Motif Atlas
- Homologous match to IL_4V88_394
- Geometric discrepancy: 0.2472
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
6GZ3|1|B1|G|145
6GZ3|1|B1|G|146
6GZ3|1|B1|A|147
6GZ3|1|B1|U|148
6GZ3|1|B1|A|149
6GZ3|1|B1|A|150
6GZ3|1|B1|C|151
*
6GZ3|1|B1|G|167
6GZ3|1|B1|C|168
6GZ3|1|B1|U|169
6GZ3|1|B1|A|170
6GZ3|1|B1|A|171
6GZ3|1|B1|U|172
6GZ3|1|B1|A|173
6GZ3|1|B1|C|174
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain AW
- ribosomal protein eL24
- Chain BG
- 40S ribosomal protein S6
- Chain BY
- ribosomal protein eS24
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