IL_6GZ4_017

3D structure

PDB id

6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUCGUG*CCGG

Length

10 nucleotides

Bulged bases

6GZ4|1|A2|U|181, 6GZ4|1|A2|U|184

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ4|1|A2|C|180
6GZ4|1|A2|U|181
6GZ4|1|A2|C|182
6GZ4|1|A2|G|183
6GZ4|1|A2|U|184
6GZ4|1|A2|G|185
*
6GZ4|1|A2|C|248
6GZ4|1|A2|C|249
6GZ4|1|A2|G|250
6GZ4|1|A2|G|251

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A3

5.8S ribosomal RNA; 5.8S rRNA

Chain AL

ribosomal protein eL13

Chain Ah

ribosomal protein uL29

Chain Aj

ribosomal protein eL37