IL_6GZ4_288

3D structure

PDB id

6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGCGG*CUGAGG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ4|1|B1|C|877
6GZ4|1|B1|G|878
6GZ4|1|B1|C|879
6GZ4|1|B1|G|880
6GZ4|1|B1|G|881
*
6GZ4|1|B1|C|905
6GZ4|1|B1|U|906
6GZ4|1|B1|G|907
6GZ4|1|B1|A|908
6GZ4|1|B1|G|909
6GZ4|1|B1|G|910

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain AR

ribosomal protein eL19

Chain BH

ribosomal protein eS7

Chain BL

ribosomal protein uS17