IL_6GZ4_293

3D structure

PDB id

6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAGGUGG*UGUUACAGCC

Length

18 nucleotides

Bulged bases

6GZ4|1|A2|A|737

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ4|1|A2|G|736
6GZ4|1|A2|A|737
6GZ4|1|A2|A|738
6GZ4|1|A2|G|739
6GZ4|1|A2|G|740
6GZ4|1|A2|U|741
6GZ4|1|A2|G|742
6GZ4|1|A2|G|743
*
6GZ4|1|A2|U|898
6GZ4|1|A2|G|899
6GZ4|1|A2|U|900
6GZ4|1|A2|U|901
6GZ4|1|A2|A|902
6GZ4|1|A2|C|903
6GZ4|1|A2|A|904
6GZ4|1|A2|G|905
6GZ4|1|A2|C|906
6GZ4|1|A2|C|907

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AM

ribosomal protein eL14

Chain AS

ribosomal protein eL20