IL_6GZ5_146
3D structure
- PDB id
- 6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUC*GUGAG
- Length
- 8 nucleotides
- Bulged bases
- 6GZ5|1|A2|G|4484, 6GZ5|1|A2|A|4485
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ5_146 not in the Motif Atlas
- Homologous match to IL_8C3A_116
- Geometric discrepancy: 0.1076
- The information below is about IL_8C3A_116
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
6GZ5|1|A2|C|4418
6GZ5|1|A2|U|4419
6GZ5|1|A2|C|4420
*
6GZ5|1|A2|G|4482
6GZ5|1|A2|U|4483
6GZ5|1|A2|G|4484
6GZ5|1|A2|A|4485
6GZ5|1|A2|G|4486
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AB
- ribosomal protein uL3
- Chain AV
- ribosomal protein uL14
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