IL_6GZQ_081

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CGU*ACAG

Length

7 nucleotides

Bulged bases

6GZQ|1|A1|A|2616

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6GZQ_081 not in the Motif Atlas

Homologous match to IL_7A0S_092

Geometric discrepancy: 0.2268

The information below is about IL_7A0S_092

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

6GZQ|1|A1|C|2605
6GZQ|1|A1|G|2606
6GZQ|1|A1|U|2607
*
6GZQ|1|A1|A|2614
6GZQ|1|A1|C|2615
6GZQ|1|A1|A|2616
6GZQ|1|A1|G|2617

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2