IL_6GZQ_090
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- UGUAAG*UUGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_090 not in the Motif Atlas
- Geometric match to IL_7RQB_110
- Geometric discrepancy: 0.1583
- The information below is about IL_7RQB_110
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.5
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6GZQ|1|A1|U|2859
6GZQ|1|A1|G|2860
6GZQ|1|A1|U|2861
6GZQ|1|A1|A|2862
6GZQ|1|A1|A|2863
6GZQ|1|A1|G|2864
*
6GZQ|1|A1|U|2877
6GZQ|1|A1|U|2878
6GZQ|1|A1|G|2879
6GZQ|1|A1|A|2880
6GZQ|1|A1|G|2881
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain M1
- 50S ribosomal protein L17
- Chain O1
- 50S ribosomal protein L19
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