IL_6GZQ_160
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 6GZQ|1|A1|G|2016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_160 not in the Motif Atlas
- Homologous match to IL_7A0S_062
- Geometric discrepancy: 0.1898
- The information below is about IL_7A0S_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
6GZQ|1|A1|A|1718
6GZQ|1|A1|C|1719
6GZQ|1|A1|U|1720
6GZQ|1|A1|C|1721
6GZQ|1|A1|U|1722
6GZQ|1|A1|G|1723
*
6GZQ|1|A1|C|2014
6GZQ|1|A1|U|2015
6GZQ|1|A1|G|2016
6GZQ|1|A1|U|2017
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain D1
- 50S ribosomal protein L3
- Chain J1
- 50S ribosomal protein L14
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