IL_6GZQ_187
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CGAAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 6GZQ|1|A1|A|1094, 6GZQ|1|A1|G|1158
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_187 not in the Motif Atlas
- Homologous match to IL_9DFE_041
- Geometric discrepancy: 0.5386
- The information below is about IL_9DFE_041
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.3
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
6GZQ|1|A1|C|1091
6GZQ|1|A1|G|1092
6GZQ|1|A1|A|1093
6GZQ|1|A1|A|1094
6GZQ|1|A1|G|1095
6GZQ|1|A1|A|1096
6GZQ|1|A1|C|1097
6GZQ|1|A1|A|1098
6GZQ|1|A1|G|1099
*
6GZQ|1|A1|U|1156
6GZQ|1|A1|C|1157
6GZQ|1|A1|G|1158
6GZQ|1|A1|A|1159
6GZQ|1|A1|G|1160
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain G1
- 50S ribosomal protein L6
Coloring options: