IL_6GZX_017
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- GCCA*UGC
- Length
- 7 nucleotides
- Bulged bases
- 6GZX|1|A1|C|1043
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZX_017 not in the Motif Atlas
- Geometric match to IL_3RG5_002
- Geometric discrepancy: 0.3141
- The information below is about IL_3RG5_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_68118.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 29
Unit IDs
6GZX|1|A1|G|1041
6GZX|1|A1|C|1042
6GZX|1|A1|C|1043
6GZX|1|A1|A|1044
*
6GZX|1|A1|U|1207
6GZX|1|A1|G|1208
6GZX|1|A1|C|1209
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain I1
- 50S ribosomal protein L13
- Chain P1
- 50S ribosomal protein L20
- Chain Q1
- 50S ribosomal protein L21
- Chain Y1
- 50S ribosomal protein L30
Coloring options: