IL_6GZX_021
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- GGUAAAGGAUG*CGCCGAAAAUGAUCGGGGC
- Length
- 30 nucleotides
- Bulged bases
- 6GZX|1|A1|U|1074, 6GZX|1|A1|U|1081, 6GZX|1|A1|U|1178, 6GZX|1|A1|G|1179
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A1|G|1072
6GZX|1|A1|G|1073
6GZX|1|A1|U|1074
6GZX|1|A1|A|1075
6GZX|1|A1|A|1076
6GZX|1|A1|A|1077
6GZX|1|A1|G|1078
6GZX|1|A1|G|1079
6GZX|1|A1|A|1080
6GZX|1|A1|U|1081
6GZX|1|A1|G|1082
*
6GZX|1|A1|C|1169
6GZX|1|A1|G|1170
6GZX|1|A1|C|1171
6GZX|1|A1|C|1172
6GZX|1|A1|G|1173
6GZX|1|A1|A|1174
6GZX|1|A1|A|1175
6GZX|1|A1|A|1176
6GZX|1|A1|A|1177
6GZX|1|A1|U|1178
6GZX|1|A1|G|1179
6GZX|1|A1|A|1180
6GZX|1|A1|U|1181
6GZX|1|A1|C|1182
6GZX|1|A1|G|1183
6GZX|1|A1|G|1184
6GZX|1|A1|G|1185
6GZX|1|A1|G|1186
6GZX|1|A1|C|1187
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 5S ribosomal RNA; 5S rRNA
- Chain D1
- 50S ribosomal protein L3
- Chain G1
- 50S ribosomal protein L6
- Chain I1
- 50S ribosomal protein L13
- Chain L1
- 50S ribosomal protein L16
- Chain e1
- 50S ribosomal protein L36
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