IL_6GZX_022

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGCGAAGACAGCC*GGUCGAGUG

Length

22 nucleotides

Bulged bases

6GZX|1|A1|A|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|C|1089
6GZX|1|A1|G|1090
6GZX|1|A1|C|1091
6GZX|1|A1|G|1092
6GZX|1|A1|A|1093
6GZX|1|A1|A|1094
6GZX|1|A1|G|1095
6GZX|1|A1|A|1096
6GZX|1|A1|C|1097
6GZX|1|A1|A|1098
6GZX|1|A1|G|1099
6GZX|1|A1|C|1100
6GZX|1|A1|C|1101
*
6GZX|1|A1|G|1154
6GZX|1|A1|G|1155
6GZX|1|A1|U|1156
6GZX|1|A1|C|1157
6GZX|1|A1|G|1158
6GZX|1|A1|A|1159
6GZX|1|A1|G|1160
6GZX|1|A1|U|1161
6GZX|1|A1|G|1162

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain G1

50S ribosomal protein L6

Chain U1

50S ribosomal protein L25