IL_6GZX_029

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

UAGGCUAG*CGAAGCCAGG

Length

18 nucleotides

Bulged bases

6GZX|1|A1|A|1603, 6GZX|1|A1|G|1608

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|U|1481
6GZX|1|A1|A|1482
6GZX|1|A1|G|1483
6GZX|1|A1|G|1484
6GZX|1|A1|C|1485
6GZX|1|A1|U|1486
6GZX|1|A1|A|1487
6GZX|1|A1|G|1488
*
6GZX|1|A1|C|1600
6GZX|1|A1|G|1601
6GZX|1|A1|A|1602
6GZX|1|A1|A|1603
6GZX|1|A1|G|1604
6GZX|1|A1|C|1605
6GZX|1|A1|C|1606
6GZX|1|A1|A|1607
6GZX|1|A1|G|1608
6GZX|1|A1|G|1609

Current chains

Chain A1

23S ribosomal RNA

Nearby chains