IL_6GZX_047

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GCGAGGC*GCCGAGC

Length

14 nucleotides

Bulged bases

6GZX|1|A1|G|2379

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|G|2363
6GZX|1|A1|C|2364
6GZX|1|A1|G|2365
6GZX|1|A1|A|2366
6GZX|1|A1|G|2367
6GZX|1|A1|G|2368
6GZX|1|A1|C|2369
*
6GZX|1|A1|G|2376
6GZX|1|A1|C|2377
6GZX|1|A1|C|2378
6GZX|1|A1|G|2379
6GZX|1|A1|A|2380
6GZX|1|A1|G|2381
6GZX|1|A1|C|2382

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain V1

50S ribosomal protein L27

Chain b1

50S ribosomal protein L33

Chain d1

50S ribosomal protein L35