IL_6GZX_083

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGUUCC*GAAGUG

Length

12 nucleotides

Bulged bases

6GZX|1|A2|G|1296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|C|1243
6GZX|1|A2|G|1244
6GZX|1|A2|U|1245
6GZX|1|A2|U|1246
6GZX|1|A2|C|1247
6GZX|1|A2|C|1248
*
6GZX|1|A2|G|1293
6GZX|1|A2|A|1294
6GZX|1|A2|A|1295
6GZX|1|A2|G|1296
6GZX|1|A2|U|1297
6GZX|1|A2|G|1298

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain E2

50S ribosomal protein L4

Chain K2

50S ribosomal protein L15

Chain P2

50S ribosomal protein L20