IL_6GZX_084

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CCGAUG*UAAGGG

Length

12 nucleotides

Bulged bases

6GZX|1|A2|U|1252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|C|1248
6GZX|1|A2|C|1249
6GZX|1|A2|G|1250
6GZX|1|A2|A|1251
6GZX|1|A2|U|1252
6GZX|1|A2|G|1253
*
6GZX|1|A2|U|1288
6GZX|1|A2|A|1289
6GZX|1|A2|A|1290
6GZX|1|A2|G|1291
6GZX|1|A2|G|1292
6GZX|1|A2|G|1293

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain E2

50S ribosomal protein L4

Chain K2

50S ribosomal protein L15

Chain P2

50S ribosomal protein L20