IL_6GZX_090

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

AGGUGCGAUG*CUAAGCACAACCU

Length

23 nucleotides

Bulged bases

6GZX|1|A2|U|1468, 6GZX|1|A2|C|1633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|A|1460
6GZX|1|A2|G|1461
6GZX|1|A2|G|1462
6GZX|1|A2|U|1463
6GZX|1|A2|G|1464
6GZX|1|A2|C|1465
6GZX|1|A2|G|1466
6GZX|1|A2|A|1467
6GZX|1|A2|U|1468
6GZX|1|A2|G|1469
*
6GZX|1|A2|C|1626
6GZX|1|A2|U|1627
6GZX|1|A2|A|1628
6GZX|1|A2|A|1629
6GZX|1|A2|G|1630
6GZX|1|A2|C|1631
6GZX|1|A2|A|1632
6GZX|1|A2|C|1633
6GZX|1|A2|A|1634
6GZX|1|A2|A|1635
6GZX|1|A2|C|1636
6GZX|1|A2|C|1637
6GZX|1|A2|U|1638

Current chains

Chain A2

23S ribosomal RNA

Nearby chains