IL_6GZX_111

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GACGA*UCUAUC

Length

11 nucleotides

Bulged bases

6GZX|1|A2|C|2079, 6GZX|1|A2|C|2626, 6GZX|1|A2|U|2627

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|2077
6GZX|1|A2|A|2078
6GZX|1|A2|C|2079
6GZX|1|A2|G|2080
6GZX|1|A2|A|2081
*
6GZX|1|A2|U|2625
6GZX|1|A2|C|2626
6GZX|1|A2|U|2627
6GZX|1|A2|A|2628
6GZX|1|A2|U|2629
6GZX|1|A2|C|2630

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain R2

50S ribosomal protein L22

Chain a2

50S ribosomal protein L32