IL_6GZX_126

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGCAGGAGGCUUGAG*CAAG

Length

19 nucleotides

Bulged bases

6GZX|1|A2|A|2643

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|C|2640
6GZX|1|A2|G|2641
6GZX|1|A2|C|2642
6GZX|1|A2|A|2643
6GZX|1|A2|G|2644
6GZX|1|A2|G|2645
6GZX|1|A2|A|2646
6GZX|1|A2|G|2647
6GZX|1|A2|G|2648
6GZX|1|A2|C|2649
6GZX|1|A2|U|2650
6GZX|1|A2|U|2651
6GZX|1|A2|G|2652
6GZX|1|A2|A|2653
6GZX|1|A2|G|2654
*
6GZX|1|A2|C|2789
6GZX|1|A2|A|2790
6GZX|1|A2|A|2791
6GZX|1|A2|G|2792

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain I2

50S ribosomal protein L13