IL_6GZX_128

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

UGGUUUCC*GGUAGCCA

Length

16 nucleotides

Bulged bases

6GZX|1|A2|U|2703, 6GZX|1|A2|C|2704

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|U|2698
6GZX|1|A2|G|2699
6GZX|1|A2|G|2700
6GZX|1|A2|U|2701
6GZX|1|A2|U|2702
6GZX|1|A2|U|2703
6GZX|1|A2|C|2704
6GZX|1|A2|C|2705
*
6GZX|1|A2|G|2733
6GZX|1|A2|G|2734
6GZX|1|A2|U|2735
6GZX|1|A2|A|2736
6GZX|1|A2|G|2737
6GZX|1|A2|C|2738
6GZX|1|A2|C|2739
6GZX|1|A2|A|2740

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain J2

50S ribosomal protein L14

Chain M2

50S ribosomal protein L17

Chain O2

50S ribosomal protein L19