IL_6GZX_132
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- GUGAA*UUAC
- Length
- 9 nucleotides
- Bulged bases
- 6GZX|1|A3|G|31
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZX_132 not in the Motif Atlas
- Geometric match to IL_6CZR_168
- Geometric discrepancy: 0.2722
- The information below is about IL_6CZR_168
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67743.1
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 9
Unit IDs
6GZX|1|A3|G|29
6GZX|1|A3|U|30
6GZX|1|A3|G|31
6GZX|1|A3|A|32
6GZX|1|A3|A|33
*
6GZX|1|A3|U|534
6GZX|1|A3|U|535
6GZX|1|A3|A|536
6GZX|1|A3|C|537
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain L3
- 30S ribosomal protein S12
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