IL_6GZX_140

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

UUCCGCAAUGG*CUGACGGA

Length

19 nucleotides

Bulged bases

6GZX|1|A3|U|363, 6GZX|1|A3|A|368, 6GZX|1|A3|G|383

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A3|U|362
6GZX|1|A3|U|363
6GZX|1|A3|C|364
6GZX|1|A3|C|365
6GZX|1|A3|G|366
6GZX|1|A3|C|367
6GZX|1|A3|A|368
6GZX|1|A3|A|369
6GZX|1|A3|U|370
6GZX|1|A3|G|371
6GZX|1|A3|G|372
*
6GZX|1|A3|C|381
6GZX|1|A3|U|382
6GZX|1|A3|G|383
6GZX|1|A3|A|384
6GZX|1|A3|C|385
6GZX|1|A3|G|386
6GZX|1|A3|G|387
6GZX|1|A3|A|388

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain P3

30S ribosomal protein S16