IL_6GZX_144

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

UGUAGGC*GCUGAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A3|U|563
6GZX|1|A3|G|564
6GZX|1|A3|U|565
6GZX|1|A3|A|566
6GZX|1|A3|G|567
6GZX|1|A3|G|568
6GZX|1|A3|C|569
*
6GZX|1|A3|G|738
6GZX|1|A3|C|739
6GZX|1|A3|U|740
6GZX|1|A3|G|741
6GZX|1|A3|A|742
6GZX|1|A3|G|743
6GZX|1|A3|G|744

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain A1

Large subunit ribosomal RNA; LSU rRNA

Chain H3

30S ribosomal protein S8

Chain L3

30S ribosomal protein S12

Chain O3

30S ribosomal protein S15

Chain Q3

30S ribosomal protein S17