IL_6GZX_174

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GACAACCCG*CGGGCUAAUC

Length

19 nucleotides

Bulged bases

6GZX|1|A4|U|167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|G|142
6GZX|1|A4|A|143
6GZX|1|A4|C|144
6GZX|1|A4|A|145
6GZX|1|A4|A|146
6GZX|1|A4|C|147
6GZX|1|A4|C|148
6GZX|1|A4|C|149
6GZX|1|A4|G|150
*
6GZX|1|A4|C|159
6GZX|1|A4|G|160
6GZX|1|A4|G|161
6GZX|1|A4|G|162
6GZX|1|A4|C|163
6GZX|1|A4|U|164
6GZX|1|A4|A|165
6GZX|1|A4|A|166
6GZX|1|A4|U|167
6GZX|1|A4|C|168

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain T4

30S ribosomal protein S20