IL_6GZX_186

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GCAUG*CGUGCU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|G|924
6GZX|1|A4|C|925
6GZX|1|A4|A|926
6GZX|1|A4|U|927
6GZX|1|A4|G|928
*
6GZX|1|A4|C|1211
6GZX|1|A4|G|1212
6GZX|1|A4|U|1213
6GZX|1|A4|G|1214
6GZX|1|A4|C|1215
6GZX|1|A4|U|1216

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain I4

30S ribosomal protein S9

Chain J4

30S ribosomal protein S10

Chain M4

30S ribosomal protein S13

Chain U4

30S ribosomal protein Thx

Chain V4

Ribosome hibernation promoting factor