IL_6GZX_187

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CUGCAUGGCCG*CUGGUCAGCAUGG

Length

24 nucleotides

Bulged bases

6GZX|1|A4|A|1182

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|C|1033
6GZX|1|A4|U|1034
6GZX|1|A4|G|1035
6GZX|1|A4|C|1036
6GZX|1|A4|A|1037
6GZX|1|A4|U|1038
6GZX|1|A4|G|1039
6GZX|1|A4|G|1040
6GZX|1|A4|C|1041
6GZX|1|A4|C|1042
6GZX|1|A4|G|1043
*
6GZX|1|A4|C|1176
6GZX|1|A4|U|1177
6GZX|1|A4|G|1178
6GZX|1|A4|G|1179
6GZX|1|A4|U|1180
6GZX|1|A4|C|1181
6GZX|1|A4|A|1182
6GZX|1|A4|G|1183
6GZX|1|A4|C|1184
6GZX|1|A4|A|1185
6GZX|1|A4|U|1186
6GZX|1|A4|G|1187
6GZX|1|A4|G|1188

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain C4

30S ribosomal protein S3

Chain E4

30S ribosomal protein S5

Chain J4

30S ribosomal protein S10

Chain N4

30S ribosomal protein S14 type Z

Chain V4

Ribosome hibernation promoting factor