IL_6GZX_192

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGAGCGGG*CCCGUGAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|G|1398
6GZX|1|A4|G|1399
6GZX|1|A4|A|1400
6GZX|1|A4|G|1401
6GZX|1|A4|C|1402
6GZX|1|A4|G|1403
6GZX|1|A4|G|1404
6GZX|1|A4|G|1405
*
6GZX|1|A4|C|1454
6GZX|1|A4|C|1455
6GZX|1|A4|C|1456
6GZX|1|A4|G|1457
6GZX|1|A4|U|1458
6GZX|1|A4|G|1459
6GZX|1|A4|A|1460
6GZX|1|A4|C|1461

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain J2

50S ribosomal protein L14