IL_6GZX_206
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CCAAGUCUGGGCUAAGUGGUAAAGGAUG*CGCCGAAAAUGAUCG
- Length
- 43 nucleotides
- Bulged bases
- 6GZX|1|A1|U|1060, 6GZX|1|A1|U|1074, 6GZX|1|A1|U|1081, 6GZX|1|A1|A|1175, 6GZX|1|A1|A|1176, 6GZX|1|A1|A|1177, 6GZX|1|A1|U|1178
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A1|C|1055
6GZX|1|A1|C|1056
6GZX|1|A1|A|1057
6GZX|1|A1|A|1058
6GZX|1|A1|G|1059
6GZX|1|A1|U|1060
6GZX|1|A1|C|1061
6GZX|1|A1|U|1062
6GZX|1|A1|G|1063
6GZX|1|A1|G|1064
6GZX|1|A1|G|1065
6GZX|1|A1|C|1066
6GZX|1|A1|U|1067
6GZX|1|A1|A|1068
6GZX|1|A1|A|1069
6GZX|1|A1|G|1070
6GZX|1|A1|U|1071
6GZX|1|A1|G|1072
6GZX|1|A1|G|1073
6GZX|1|A1|U|1074
6GZX|1|A1|A|1075
6GZX|1|A1|A|1076
6GZX|1|A1|A|1077
6GZX|1|A1|G|1078
6GZX|1|A1|G|1079
6GZX|1|A1|A|1080
6GZX|1|A1|U|1081
6GZX|1|A1|G|1082
*
6GZX|1|A1|C|1169
6GZX|1|A1|G|1170
6GZX|1|A1|C|1171
6GZX|1|A1|C|1172
6GZX|1|A1|G|1173
6GZX|1|A1|A|1174
6GZX|1|A1|A|1175
6GZX|1|A1|A|1176
6GZX|1|A1|A|1177
6GZX|1|A1|U|1178
6GZX|1|A1|G|1179
6GZX|1|A1|A|1180
6GZX|1|A1|U|1181
6GZX|1|A1|C|1182
6GZX|1|A1|G|1183
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 5S ribosomal RNA; 5S rRNA
- Chain D1
- 50S ribosomal protein L3
- Chain G1
- 50S ribosomal protein L6
- Chain I1
- 50S ribosomal protein L13
- Chain L1
- 50S ribosomal protein L16
- Chain P1
- 50S ribosomal protein L20
- Chain e1
- 50S ribosomal protein L36
Coloring options: