IL_6GZX_220

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CCGAAACCG*CGGAGAUAGCUG

Length

21 nucleotides

Bulged bases

6GZX|1|A2|G|850, 6GZX|1|A2|G|854

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|C|721
6GZX|1|A2|C|722
6GZX|1|A2|G|723
6GZX|1|A2|A|724
6GZX|1|A2|A|725
6GZX|1|A2|A|726
6GZX|1|A2|C|727
6GZX|1|A2|C|728
6GZX|1|A2|G|729
*
6GZX|1|A2|C|846
6GZX|1|A2|G|847
6GZX|1|A2|G|848
6GZX|1|A2|A|849
6GZX|1|A2|G|850
6GZX|1|A2|A|851
6GZX|1|A2|U|852
6GZX|1|A2|A|853
6GZX|1|A2|G|854
6GZX|1|A2|C|855
6GZX|1|A2|U|856
6GZX|1|A2|G|857

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain E2

50S ribosomal protein L4

Chain K2

50S ribosomal protein L15

Chain c2

50S ribosomal protein L34