IL_6GZX_223

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CUAAGGCCCCCAAG*CGCCGAAG

Length

22 nucleotides

Bulged bases

6GZX|1|A2|C|1053, 6GZX|1|A2|A|1204

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|C|1046
6GZX|1|A2|U|1047
6GZX|1|A2|A|1048
6GZX|1|A2|A|1049
6GZX|1|A2|G|1050
6GZX|1|A2|G|1051
6GZX|1|A2|C|1052
6GZX|1|A2|C|1053
6GZX|1|A2|C|1054
6GZX|1|A2|C|1055
6GZX|1|A2|C|1056
6GZX|1|A2|A|1057
6GZX|1|A2|A|1058
6GZX|1|A2|G|1059
*
6GZX|1|A2|C|1198
6GZX|1|A2|G|1199
6GZX|1|A2|C|1200
6GZX|1|A2|C|1201
6GZX|1|A2|G|1202
6GZX|1|A2|A|1203
6GZX|1|A2|A|1204
6GZX|1|A2|G|1205

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain B2

5S ribosomal RNA; 5S rRNA

Chain I2

50S ribosomal protein L13

Chain P2

50S ribosomal protein L20

Chain Q2

50S ribosomal protein L21

Chain Y2

50S ribosomal protein L30