IL_6GZX_227

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGUGAAG*CGUAGCC

Length

14 nucleotides

Bulged bases

6GZX|1|A2|C|1423

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|1403
6GZX|1|A2|G|1404
6GZX|1|A2|U|1405
6GZX|1|A2|G|1406
6GZX|1|A2|A|1407
6GZX|1|A2|A|1408
6GZX|1|A2|G|1409
*
6GZX|1|A2|C|1418
6GZX|1|A2|G|1419
6GZX|1|A2|U|1420
6GZX|1|A2|A|1421
6GZX|1|A2|G|1422
6GZX|1|A2|C|1423
6GZX|1|A2|C|1424

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain C2

50S ribosomal protein L2

Chain W2

50S ribosomal protein L28

Chain c2

50S ribosomal protein L34