IL_6GZX_247

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GACGGUGGGAGAGGG*CCUGGUCCACCCGUGAC

Length

32 nucleotides

Bulged bases

6GZX|1|A3|A|648, 6GZX|1|A3|C|732

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A3|G|637
6GZX|1|A3|A|638
6GZX|1|A3|C|639
6GZX|1|A3|G|640
6GZX|1|A3|G|641
6GZX|1|A3|U|642
6GZX|1|A3|G|643
6GZX|1|A3|G|644
6GZX|1|A3|G|645
6GZX|1|A3|A|646
6GZX|1|A3|G|647
6GZX|1|A3|A|648
6GZX|1|A3|G|649
6GZX|1|A3|G|650
6GZX|1|A3|G|651
*
6GZX|1|A3|C|721
6GZX|1|A3|C|722
6GZX|1|A3|U|723
6GZX|1|A3|G|724
6GZX|1|A3|G|725
6GZX|1|A3|U|726
6GZX|1|A3|C|727
6GZX|1|A3|C|728
6GZX|1|A3|A|729
6GZX|1|A3|C|730
6GZX|1|A3|C|731
6GZX|1|A3|C|732
6GZX|1|A3|G|733
6GZX|1|A3|U|734
6GZX|1|A3|G|735
6GZX|1|A3|A|736
6GZX|1|A3|C|737

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain F3

30S ribosomal protein S6

Chain H3

30S ribosomal protein S8

Chain O3

30S ribosomal protein S15

Chain R3

30S ribosomal protein S18