IL_6GZX_249

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGGAGCAAACCGG*CCGGGUAGUC

Length

23 nucleotides

Bulged bases

6GZX|1|A3|G|759

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A3|G|757
6GZX|1|A3|G|758
6GZX|1|A3|G|759
6GZX|1|A3|A|760
6GZX|1|A3|G|761
6GZX|1|A3|C|762
6GZX|1|A3|A|763
6GZX|1|A3|A|764
6GZX|1|A3|A|765
6GZX|1|A3|C|766
6GZX|1|A3|C|767
6GZX|1|A3|G|768
6GZX|1|A3|G|769
*
6GZX|1|A3|C|779
6GZX|1|A3|C|780
6GZX|1|A3|G|781
6GZX|1|A3|G|782
6GZX|1|A3|G|783
6GZX|1|A3|U|784
6GZX|1|A3|A|785
6GZX|1|A3|G|786
6GZX|1|A3|U|787
6GZX|1|A3|C|788

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain A1

Large subunit ribosomal RNA; LSU rRNA

Chain C1

50S ribosomal protein L2

Chain K3

30S ribosomal protein S11

Chain V3

Ribosome hibernation promoting factor