IL_6GZX_252

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

UG*UGUUGGGUUAAGUCCCGCAA

Length

22 nucleotides

Bulged bases

6GZX|1|A3|U|1068

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A3|U|1055
6GZX|1|A3|G|1056
*
6GZX|1|A3|U|1065
6GZX|1|A3|G|1066
6GZX|1|A3|U|1067
6GZX|1|A3|U|1068
6GZX|1|A3|G|1069
6GZX|1|A3|G|1070
6GZX|1|A3|G|1071
6GZX|1|A3|U|1072
6GZX|1|A3|U|1073
6GZX|1|A3|A|1074
6GZX|1|A3|A|1075
6GZX|1|A3|G|1076
6GZX|1|A3|U|1077
6GZX|1|A3|C|1078
6GZX|1|A3|C|1079
6GZX|1|A3|C|1080
6GZX|1|A3|G|1081
6GZX|1|A3|C|1082
6GZX|1|A3|A|1083
6GZX|1|A3|A|1084

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain B3

30S ribosomal protein S2

Chain E3

30S ribosomal protein S5

Chain G3

30S ribosomal protein S7