IL_6GZX_256

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CUACCCGAAGUC*GCCGAGGGUAGG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A3|C|1408
6GZX|1|A3|U|1409
6GZX|1|A3|A|1410
6GZX|1|A3|C|1411
6GZX|1|A3|C|1412
6GZX|1|A3|C|1413
6GZX|1|A3|G|1414
6GZX|1|A3|A|1415
6GZX|1|A3|A|1416
6GZX|1|A3|G|1417
6GZX|1|A3|U|1418
6GZX|1|A3|C|1419
*
6GZX|1|A3|G|1441
6GZX|1|A3|C|1442
6GZX|1|A3|C|1443
6GZX|1|A3|G|1444
6GZX|1|A3|A|1445
6GZX|1|A3|G|1446
6GZX|1|A3|G|1447
6GZX|1|A3|G|1448
6GZX|1|A3|U|1449
6GZX|1|A3|A|1450
6GZX|1|A3|G|1451
6GZX|1|A3|G|1452

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain A1

Large subunit ribosomal RNA; LSU rRNA

Chain J1

50S ribosomal protein L14

Chain O1

50S ribosomal protein L19

Chain T3

30S ribosomal protein S20