IL_6GZX_258

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGGGACGAAACC*GACUGACGGUACCG

Length

26 nucleotides

Bulged bases

6GZX|1|A4|U|464, 6GZX|1|A4|C|473

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|C|438
6GZX|1|A4|G|439
6GZX|1|A4|G|440
6GZX|1|A4|G|441
6GZX|1|A4|A|442
6GZX|1|A4|C|443
6GZX|1|A4|G|444
6GZX|1|A4|A|445
6GZX|1|A4|A|446
6GZX|1|A4|A|447
6GZX|1|A4|C|448
6GZX|1|A4|C|449
*
6GZX|1|A4|G|461
6GZX|1|A4|A|462
6GZX|1|A4|C|463
6GZX|1|A4|U|464
6GZX|1|A4|G|465
6GZX|1|A4|A|466
6GZX|1|A4|C|467
6GZX|1|A4|G|468
6GZX|1|A4|G|469
6GZX|1|A4|U|470
6GZX|1|A4|A|471
6GZX|1|A4|C|472
6GZX|1|A4|C|473
6GZX|1|A4|G|474

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain D4

30S ribosomal protein S4

Chain P4

30S ribosomal protein S16