IL_6GZX_291

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGGGUGUAAG*UUGAGCCGAC

Length

20 nucleotides

Bulged bases

6GZX|1|A2|U|2878, 6GZX|1|A2|C|2883

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|2855
6GZX|1|A2|G|2856
6GZX|1|A2|G|2857
6GZX|1|A2|G|2858
6GZX|1|A2|U|2859
6GZX|1|A2|G|2860
6GZX|1|A2|U|2861
6GZX|1|A2|A|2862
6GZX|1|A2|A|2863
6GZX|1|A2|G|2864
*
6GZX|1|A2|U|2877
6GZX|1|A2|U|2878
6GZX|1|A2|G|2879
6GZX|1|A2|A|2880
6GZX|1|A2|G|2881
6GZX|1|A2|C|2882
6GZX|1|A2|C|2883
6GZX|1|A2|G|2884
6GZX|1|A2|A|2885
6GZX|1|A2|C|2886

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain M2

50S ribosomal protein L17

Chain O2

50S ribosomal protein L19