IL_6GZX_295

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

AGGAAGAAG*UGUAAACU

Length

17 nucleotides

Bulged bases

6GZX|1|A3|A|407

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A3|A|403
6GZX|1|A3|G|404
6GZX|1|A3|G|405
6GZX|1|A3|A|406
6GZX|1|A3|A|407
6GZX|1|A3|G|408
6GZX|1|A3|A|409
6GZX|1|A3|A|410
6GZX|1|A3|G|411
*
6GZX|1|A3|U|422
6GZX|1|A3|G|423
6GZX|1|A3|U|424
6GZX|1|A3|A|425
6GZX|1|A3|A|426
6GZX|1|A3|A|427
6GZX|1|A3|C|428
6GZX|1|A3|U|429

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain D3

30S ribosomal protein S4