IL_6GZX_301

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CAUGUGAAAGAC*GGGGAGCGUG

Length

22 nucleotides

Bulged bases

6GZX|1|A4|G|614

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|C|584
6GZX|1|A4|A|585
6GZX|1|A4|U|586
6GZX|1|A4|G|587
6GZX|1|A4|U|588
6GZX|1|A4|G|589
6GZX|1|A4|A|590
6GZX|1|A4|A|591
6GZX|1|A4|A|592
6GZX|1|A4|G|593
6GZX|1|A4|A|594
6GZX|1|A4|C|595
*
6GZX|1|A4|G|611
6GZX|1|A4|G|612
6GZX|1|A4|G|613
6GZX|1|A4|G|614
6GZX|1|A4|A|615
6GZX|1|A4|G|616
6GZX|1|A4|C|617
6GZX|1|A4|G|618
6GZX|1|A4|U|619
6GZX|1|A4|G|620

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain D4

30S ribosomal protein S4

Chain H4

30S ribosomal protein S8

Chain P4

30S ribosomal protein S16

Chain Q4

30S ribosomal protein S17