IL_6GZZ_016

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGAG*CUAACC

Length

10 nucleotides

Bulged bases

6GZZ|1|A1|G|825, 6GZZ|1|A1|A|837, 6GZZ|1|A1|A|838, 6GZZ|1|A1|C|839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|G|824
6GZZ|1|A1|G|825
6GZZ|1|A1|A|826
6GZZ|1|A1|G|827
*
6GZZ|1|A1|C|835
6GZZ|1|A1|U|836
6GZZ|1|A1|A|837
6GZZ|1|A1|A|838
6GZZ|1|A1|C|839
6GZZ|1|A1|C|840

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2

Chain E1

50S ribosomal protein L4

Chain R1

50S ribosomal protein L22

Chain c1

50S ribosomal protein L34