IL_6GZZ_046

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CAAGGAACUCUG*CUGUCUCG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|1712
6GZZ|1|A1|A|1713
6GZZ|1|A1|A|1714
6GZZ|1|A1|G|1715
6GZZ|1|A1|G|1716
6GZZ|1|A1|A|1717
6GZZ|1|A1|A|1718
6GZZ|1|A1|C|1719
6GZZ|1|A1|U|1720
6GZZ|1|A1|C|1721
6GZZ|1|A1|U|1722
6GZZ|1|A1|G|1723
*
6GZZ|1|A1|C|2014
6GZZ|1|A1|U|2015
6GZZ|1|A1|G|2016
6GZZ|1|A1|U|2017
6GZZ|1|A1|C|2018
6GZZ|1|A1|U|2019
6GZZ|1|A1|C|2020
6GZZ|1|A1|G|2021

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain D1

50S ribosomal protein L3

Chain J1

50S ribosomal protein L14

Chain O1

50S ribosomal protein L19