IL_6GZZ_047
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 6GZZ|1|A1|G|1748
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_047 not in the Motif Atlas
- Homologous match to IL_7RQB_068
- Geometric discrepancy: 0.2272
- The information below is about IL_7RQB_068
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.2
- Basepair signature
- cWW-tSH-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6GZZ|1|A1|C|1735
6GZZ|1|A1|G|1736
6GZZ|1|A1|U|1737
6GZZ|1|A1|A|1738
6GZZ|1|A1|A|1739
6GZZ|1|A1|C|1740
*
6GZZ|1|A1|G|1745
6GZZ|1|A1|G|1746
6GZZ|1|A1|A|1747
6GZZ|1|A1|G|1748
6GZZ|1|A1|A|1749
6GZZ|1|A1|A|1750
6GZZ|1|A1|G|1751
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain A3
- Small subunit ribosomal RNA; SSU rRNA
- Chain C1
- 50S ribosomal protein L2
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