IL_6GZZ_054

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGGAGGG*CCCGAAC

Length

14 nucleotides

Bulged bases

6GZZ|1|A1|G|1894

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|G|1889
6GZZ|1|A1|G|1890
6GZZ|1|A1|G|1891
6GZZ|1|A1|A|1892
6GZZ|1|A1|G|1893
6GZZ|1|A1|G|1894
6GZZ|1|A1|G|1895
*
6GZZ|1|A1|C|1904
6GZZ|1|A1|C|1905
6GZZ|1|A1|C|1906
6GZZ|1|A1|G|1907
6GZZ|1|A1|A|1908
6GZZ|1|A1|A|1909
6GZZ|1|A1|C|1910

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain W1

50S ribosomal protein L28