IL_6GZZ_065

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CUCG*CACGCGAG

Length

12 nucleotides

Bulged bases

6GZZ|1|A1|A|2586, 6GZZ|1|A1|C|2587, 6GZZ|1|A1|G|2590, 6GZZ|1|A1|A|2591

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|2524
6GZZ|1|A1|U|2525
6GZZ|1|A1|C|2526
6GZZ|1|A1|G|2527
*
6GZZ|1|A1|C|2585
6GZZ|1|A1|A|2586
6GZZ|1|A1|C|2587
6GZZ|1|A1|G|2588
6GZZ|1|A1|C|2589
6GZZ|1|A1|G|2590
6GZZ|1|A1|A|2591
6GZZ|1|A1|G|2592

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain D1

50S ribosomal protein L3

Chain I1

50S ribosomal protein L13

Chain a1

50S ribosomal protein L32