IL_6GZZ_068

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CCUCUGG*CCAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|2694
6GZZ|1|A1|C|2695
6GZZ|1|A1|U|2696
6GZZ|1|A1|C|2697
6GZZ|1|A1|U|2698
6GZZ|1|A1|G|2699
6GZZ|1|A1|G|2700
*
6GZZ|1|A1|C|2738
6GZZ|1|A1|C|2739
6GZZ|1|A1|A|2740
6GZZ|1|A1|U|2741
6GZZ|1|A1|G|2742

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain D1

50S ribosomal protein L3

Chain J1

50S ribosomal protein L14

Chain M1

50S ribosomal protein L17

Chain O1

50S ribosomal protein L19