IL_6GZZ_086

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CUUAAGC*GCGGAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|C|630
6GZZ|1|A2|U|631
6GZZ|1|A2|U|632
6GZZ|1|A2|A|633
6GZZ|1|A2|A|634
6GZZ|1|A2|G|635
6GZZ|1|A2|C|636
*
6GZZ|1|A2|G|644
6GZZ|1|A2|C|645
6GZZ|1|A2|G|646
6GZZ|1|A2|G|647
6GZZ|1|A2|A|648
6GZZ|1|A2|G|649
6GZZ|1|A2|G|650

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain E2

50S ribosomal protein L4

Chain K2

50S ribosomal protein L15

Chain d2

50S ribosomal protein L35