IL_6GZZ_103

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGCUAAGUG*CUUAAGCCC

Length

18 nucleotides

Bulged bases

6GZZ|1|A2|U|1189, 6GZZ|1|A2|A|1191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|G|1064
6GZZ|1|A2|G|1065
6GZZ|1|A2|C|1066
6GZZ|1|A2|U|1067
6GZZ|1|A2|A|1068
6GZZ|1|A2|A|1069
6GZZ|1|A2|G|1070
6GZZ|1|A2|U|1071
6GZZ|1|A2|G|1072
*
6GZZ|1|A2|C|1187
6GZZ|1|A2|U|1188
6GZZ|1|A2|U|1189
6GZZ|1|A2|A|1190
6GZZ|1|A2|A|1191
6GZZ|1|A2|G|1192
6GZZ|1|A2|C|1193
6GZZ|1|A2|C|1194
6GZZ|1|A2|C|1195

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain G2

50S ribosomal protein L6

Chain I2

50S ribosomal protein L13

Chain e2

50S ribosomal protein L36